Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs75414672 chr7:90871234 A/G 0.000152 279 26.2 26.4 21.93 KM Plot
KIRP rs75420805 chr10:88295608 A/G 4.31E-7 285 26.37 24.3 9.77 KM Plot
KIRP rs75465236 chr7:20679568 A/G 2.38E-5 287 25.7 22.57 11.2 KM Plot
KIRP rs7546850 chr1:205059066 G/A 8.89E-5 288 23.02 27.73 23.1 KM Plot
KIRP rs75476599 chr10:124798809 C/T 0.000119 287 25.4 28.17 18.33 KM Plot
KIRP rs7549204 chr1:232011170 C/A 0.000116 282 26.37 24.67 19.65 KM Plot
KIRP rs7549206 chr1:232011176 C/A 0.000116 282 26.37 24.67 19.65 KM Plot
KIRP rs75495305 chr7:20666588 T/G 2.2E-5 289 25.93 22.57 11.2 KM Plot
KIRP rs75504237 chr10:43488562 G/A 5.14E-6 288 25.67 26.52 16.12 KM Plot
KIRP rs7551944 chr1:210029430 G/C 3.38E-7 285 24.48 31 13.72 KM Plot
KIRP rs75522770 chr21:44268431 G/A 0.000167 287 25.57 43.53 13.07 KM Plot
KIRP rs75537818 chr17:80698587 G/A 1.1E-9 286 25.67 30.7 16.4 KM Plot
KIRP rs7553876 chr1:205079915 A/G 7.28E-5 288 23.02 28.03 21.9 KM Plot
KIRP rs75570346 chr16:90048080 G/C 5.38E-5 286 24.8 38.05 10.23 KM Plot
KIRP rs75582064 chr10:43527737 T/C 4.13E-5 289 25.63 26.4 11.43 KM Plot